Harmonist Data Toolkit Report

Report date: 2020-08-17

Example Harmonist Toolkit Report

Dataset Summary

Total number of patients in dataset: 28,089

Table Summary
Age at Enrollment
Table Records Patients 0-4 5-9 10-14 15-19 20-24 Adults 25+
tblBAS 28089 28089 0 0 0 974 3388 23727
tblLTFU 28089 28089 0 0 0 974 3388 23727
tblVIS 1084237 26820 0 0 0 966 3316 22538
tblLAB_CD4 298041 27304 0 0 0 948 3317 23039
tblLAB_RNA 159234 15524 0 0 0 474 2014 13036
tblART 140435 25840 0 0 0 892 3016 21932
tblDIS 3750 3215 0 0 0 100 351 2764
SITE in Dataset
SITE Patients
Hogwarts 594
Hufflepuff 11763
Muggleton 5248
Potterburg 3208
Ravenclaw 1079
Slytherin 458
Snapetown 4099
Wizardville 1640
Summary of Uploaded IeDEA Tables
Table Records IeDEA DES Variables Extra Variables
tblBAS 28089 PATIENT, PROGRAM, BIRTH_D, BIRTH_D_A, ENROL_D, ENROL_D_A, MODE, NAIVE_Y, PROPH_Y, RECART_Y, RECART_D, RECART_D_A, AIDS_Y, AIDS_D, AIDS_D_A, GENDER, HAART_D, HAART_D_A, CENTER YEAR_ENROLLED, SITE
tblLTFU 28089 PATIENT, DROP_Y, DROP_D, DROP_D_A, DROP_RS, DEATH_Y, DEATH_D, DEATH_D_A, L_ALIVE_D, L_ALIVE_D_A CENTER, SITE
tblVIS 1084237 PATIENT, CENTER, VIS_D, VIS_D_A, CDC_STAGE, WHO_STAGE, PREG_Y GENDER_ID, SITE
tblLAB_CD4 298041 PATIENT, CD4_D, CD4_D_A, CD4_V, CD4_U CENTER, SITE
tblLAB_RNA 159234 PATIENT, RNA_D, RNA_D_A, RNA_V CENTER, SITE
tblART 140435 PATIENT, ART_ID, ART_SD, ART_SD_A, ART_ED, ART_ED_A CENTER, SITE
tblDIS 3750 PATIENT, DIS_ID, DIS_D, DIS_D_A, DIS_ED, DIS_ED_A, DIS_OUTCOME CENTER, SITE


Summary Statistics

Value Count Percent
Deceased
No 25773 91.8
Yes 2316 8.2
Treatment Naive at Enrollment
No 2940 10.5
Yes 25149 89.5
Receive Antiretroviral Therapy (ART)
Yes 25840 92.0
Missing 2249 8.0
Number of observations per year
Variable < 2012 2012 2013 2014 2015 2016 2017 2018 2019 2020 Total
Enrolled 17245 2527 2859 2391 1439 1332 295 0 0 0 28088
Visits 527073 117341 124501 118630 120098 71094 5500 0 0 0 1084237
Deaths 1313 232 234 170 216 141 10 0 0 0 2316
Transfers Out 212 19 48 94 145 139 14 0 0 0 671
Viral Load 74750 15740 16776 16726 17731 15799 1708 0 0 0 159230
CD4 152935 30781 30465 33865 26465 20152 3378 0 0 0 298041


NULL

Percent of Patients from tblBAS Included

Histograms of important dates by SITE